strax
Setup and basics
Setting up strax
Using strax
Advanced usage
Plugin development
Options and defaults
Strax data model
Superruns
Out of core computation
Recompressing & moving data
Rechunker script
Fuzzy for functionality
Developer documentation
Pipeline
Parallelization
Chunk boundary handling
Storage
Writing documentation
Release procedure
API Reference
strax package
Release notes
Release notes
strax
Index
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
|
Z
A
abs_time_to_prev_next_interval() (in module strax.processing.general)
accumulate() (strax.context.Context method)
add_lone_hits() (in module strax.processing.peak_merging)
add_method() (strax.context.Context class method)
add_reader() (strax.mailbox.Mailbox method)
add_sender() (strax.mailbox.Mailbox method)
allow_fork (strax.storage.common.Saver attribute)
allow_rechunk (strax.storage.common.Saver attribute)
(strax.storage.mongo.MongoSaver attribute)
allow_superrun (strax.plugin.Plugin attribute)
ALWAYS (strax.plugin.SaveWhen attribute)
apply_keep_columns() (in module strax.utils)
apply_selection() (in module strax.utils)
apply_time_range() (strax.storage.common.StorageBackend static method)
available_for_run() (strax.context.Context method)
B
backend_key() (strax.storage.files.DataDirectory method)
backends (strax.storage.common.StorageFrontend attribute)
baseline() (in module strax.processing.pulse_processing)
BASELINE_CUT (strax.processing.data_reduction.ReductionLevel attribute)
C
camel_to_snake() (in module strax.utils)
can_define_runs (strax.storage.common.StorageFrontend attribute)
(strax.storage.files.DataDirectory attribute)
can_rechunk() (strax.plugin.Plugin method)
CannotSplit
check_superrun() (strax.context.Context method)
child_plugin (strax.plugin.Plugin attribute)
Chunk (class in strax.chunk)
chunk() (strax.plugin.Plugin method)
chunk_number (strax.plugin.Plugin attribute)
chunk_source_size_mb (strax.plugin.Plugin attribute)
chunk_target_size_mb (strax.plugin.Plugin attribute)
clean_chunk_after_compute (strax.plugin.Plugin attribute)
cleanup() (strax.mailbox.Mailbox method)
(strax.plugin.Plugin method)
close() (strax.mailbox.Mailbox method)
(strax.storage.common.Saver method)
closed (strax.storage.common.Saver attribute)
collection (strax.storage.mongo.MongoFrontend property)
combine_configs() (in module strax.config)
compare_dict() (in module strax.utils)
compare_metadata() (strax.context.Context method)
COMPRESSED (strax.storage.common.StorageType attribute)
compressor (strax.plugin.Plugin attribute)
compute() (strax.plugin.Plugin method)
compute_area_fraction_top() (in module strax.processing.peak_properties)
compute_index_of_fraction() (in module strax.processing.peak_properties)
compute_properties() (in module strax.processing.peak_properties)
compute_takes_chunk_i (strax.plugin.Plugin attribute)
compute_takes_start_end (strax.plugin.Plugin attribute)
compute_widths() (in module strax.processing.peak_properties)
concat_overlapping_hits() (in module strax.processing.hitlets)
concatenate() (strax.chunk.Chunk class method)
conditional_entropy() (in module strax.processing.hitlets)
Config (class in strax.config)
config (strax.context.Context attribute)
(strax.plugin.Plugin attribute)
Context (class in strax.context)
context_config (strax.context.Context attribute)
continuity_check() (in module strax.chunk)
convert_structured_array_to_df() (in module strax.utils)
convert_tuple_to_list() (in module strax.utils)
copy_to_buffer() (in module strax.dtypes)
copy_to_frontend() (strax.context.Context method)
count_tags() (in module strax.utils)
create_hitlets_from_hits() (in module strax.processing.hitlets)
cut_baseline() (in module strax.processing.data_reduction)
cut_outside_hits() (in module strax.processing.data_reduction)
D
data (strax.chunk.Chunk attribute)
data_info() (strax.context.Context method)
data_itemsize() (strax.context.Context method)
data_kind (strax.chunk.Chunk attribute)
(strax.plugin.Plugin attribute)
data_kind_for() (strax.plugin.Plugin method)
data_type (strax.chunk.Chunk attribute)
(strax.storage.common.DataKey attribute)
DataCorrupted
DataDirectory (class in strax.storage.files)
DataExistsError
DataKey (class in strax.storage.common)
DataNotAvailable
default() (strax.utils.NumpyJSONEncoder method)
DEFAULT_MAX_MESSAGES (strax.mailbox.Mailbox attribute)
DEFAULT_TIMEOUT (strax.mailbox.Mailbox attribute)
define_run() (strax.context.Context method)
(strax.storage.common.StorageFrontend method)
dependencies_by_kind() (strax.plugin.Plugin method)
depends_on (strax.plugin.Plugin attribute)
deps (strax.plugin.Plugin attribute)
deregister_plugins_with_missing_dependencies() (strax.context.Context method)
deterministic_hash() (in module strax.utils)
dict_to_rec() (in module strax.utils)
diff() (in module strax.processing.general)
dirname_to_prefix() (in module strax.storage.files)
divide_outputs() (in module strax.mailbox)
do_compute() (strax.plugin.Plugin method)
dry_load_files() (in module strax.io)
dtype (strax.chunk.Chunk attribute)
(strax.plugin.Plugin attribute)
dtype_for() (strax.plugin.Plugin method)
duration (strax.chunk.Chunk property)
E
empty_result() (strax.plugin.Plugin method)
EmptyDataWarning
end (strax.chunk.Chunk attribute)
endtime() (in module strax.processing.general)
estimate_run_start_and_end() (strax.context.Context method)
EXPLICIT (strax.plugin.SaveWhen attribute)
exporter() (in module strax.utils)
F
fetch() (strax.config.Config method)
FileSaver (class in strax.storage.files)
FileSytemBackend (class in strax.storage.files)
filter_records() (in module strax.processing.pulse_processing)
filter_waveforms() (in module strax.processing.pulse_processing)
find() (strax.storage.common.StorageFrontend method)
find_hit_integration_bounds() (in module strax.processing.peak_building)
find_hits() (in module strax.processing.pulse_processing)
find_peak_groups() (in module strax.processing.peak_building)
find_peaks() (in module strax.processing.peak_building)
find_several() (strax.storage.common.StorageFrontend method)
first_chunk (strax.plugin.Plugin property)
first_subrun (strax.chunk.Chunk property)
fix_dtype() (strax.plugin.Plugin method)
flatten_dict() (in module strax.utils)
flatten_run_metadata() (in module strax.run_selection)
flush() (strax.chunk.Rechunker method)
formatted_exception() (in module strax.utils)
from_break() (in module strax.processing.general)
fully_contained_in() (in module strax.processing.general)
G
gc_collect_after_compute (strax.plugin.Plugin attribute)
gcd_of_array() (in module strax.processing.peak_merging)
get_array() (strax.context.Context method)
get_components() (strax.context.Context method)
get_data_key() (strax.context.Context method)
get_data_kinds() (strax.context.Context method)
get_default() (strax.config.Option method)
get_dependencies() (strax.context.Context method)
get_dependency_plugins() (strax.context.Context method)
get_df() (strax.context.Context method)
get_fwxm() (in module strax.processing.hitlets)
get_hitlets_data() (in module strax.processing.hitlets)
get_iter() (strax.context.Context method)
get_metadata() (strax.context.Context method)
(strax.storage.common.StorageBackend method)
(strax.storage.common.StorageFrontend method)
get_save_when() (strax.context.Context method)
get_single_plugin() (strax.context.Context method)
get_source() (strax.context.Context method)
get_source_sf() (strax.context.Context method)
get_splits() (strax.chunk.Rechunker static method)
get_zarr() (strax.context.Context method)
got_exception (strax.storage.common.Saver attribute)
group_by_kind() (in module strax.utils)
growing_result() (in module strax.utils)
H
hashablize() (in module strax.utils)
highest_density_region() (in module strax.processing.statistics)
highest_density_region_width() (in module strax.processing.hitlets)
hitlet_dtype() (in module strax.dtypes)
hitlet_properties() (in module strax.processing.hitlets)
hitlet_with_data_dtype() (in module strax.dtypes)
HITS_ONLY (strax.processing.data_reduction.ReductionLevel attribute)
I
index_of_fraction() (in module strax.processing.peak_properties)
infer_dtype() (strax.plugin.Plugin method)
inherit_docstring_from() (in module strax.utils)
input_buffer (strax.plugin.Plugin attribute)
input_timeout (strax.plugin.Plugin attribute)
InputTimeoutExceeded
integrate() (in module strax.processing.pulse_processing)
integrate_lone_hits() (in module strax.processing.peak_building)
InvalidConfiguration
InvalidFolderNameFormat
InvalidMessageNumber
inversed_tree (strax.context.Context property)
is_forked (strax.storage.common.Saver attribute)
is_ready() (strax.plugin.Plugin method)
is_stored() (strax.context.Context method)
is_superrun (strax.chunk.Chunk property)
(strax.plugin.Plugin property)
(strax.storage.common.DataKey property)
iter() (strax.plugin.Plugin method)
iter_chunk_meta() (in module strax.utils)
J
json_options (strax.storage.files.FileSaver attribute)
K
key_for() (strax.context.Context method)
keys_for_runs() (strax.context.Context method)
kill() (strax.mailbox.Mailbox method)
kill_from_exception() (strax.mailbox.Mailbox method)
L
last_subrun (strax.chunk.Chunk property)
lineage (strax.storage.common.DataKey property)
lineage() (strax.context.Context method)
lineage_hash (strax.storage.common.DataKey property)
list_available() (strax.context.Context method)
load_file() (in module strax.io)
loader() (strax.storage.common.StorageBackend method)
(strax.storage.common.StorageFrontend method)
LOCAL (strax.storage.common.StorageType attribute)
log (strax.plugin.Plugin property)
M
Mailbox (class in strax.mailbox)
MailBoxAlreadyClosed
MailboxException
MailboxFullTimeout
MailboxKilled
MailboxReadTimeout
make() (strax.context.Context method)
max_messages (strax.plugin.Plugin attribute)
MEMORY (strax.storage.common.StorageType attribute)
merge() (strax.chunk.Chunk class method)
merge_arrs() (in module strax.utils)
merge_peaks() (in module strax.processing.peak_merging)
merge_per_chunk_storage() (strax.context.Context method)
merged_dtype() (in module strax.utils)
metadata() (strax.plugin.Plugin method)
METADATA_ONLY (strax.processing.data_reduction.ReductionLevel attribute)
module
strax
strax.chunk
strax.config
strax.context
strax.dtypes
strax.io
strax.mailbox
strax.plugin
strax.processing
strax.processing.data_reduction
strax.processing.general
strax.processing.hitlets
strax.processing.peak_building
strax.processing.peak_merging
strax.processing.peak_properties
strax.processing.peak_splitting
strax.processing.pulse_processing
strax.processing.statistics
strax.processor
strax.run_selection
strax.storage
strax.storage.common
strax.storage.files
strax.storage.mongo
strax.storage.zipfiles
strax.utils
MongoBackend (class in strax.storage.mongo)
MongoFrontend (class in strax.storage.mongo)
MongoSaver (class in strax.storage.mongo)
multi_output (strax.plugin.Plugin property)
multi_run() (in module strax.utils)
N
natural_breaks_gof() (in module strax.processing.peak_splitting)
nbytes (strax.chunk.Chunk property)
NEVER (strax.plugin.SaveWhen attribute)
new_context() (strax.context.Context method)
NO_REDUCTION (strax.processing.data_reduction.ReductionLevel attribute)
NoBreakFound
NumpyJSONEncoder (class in strax.utils)
O
ONLINE (strax.storage.common.StorageType attribute)
Option (class in strax.config)
OutsideException
overlap_indices() (in module strax.processing.general)
P
parallel (strax.plugin.Plugin attribute)
parse_selection() (in module strax.utils)
peak_dtype() (in module strax.dtypes)
Plugin (class in strax.plugin)
PluginGaveWrongOutput
print_record() (in module strax.utils)
processors (strax.context.Context attribute)
profile_threaded() (in module strax.utils)
promised_continuity (strax.chunk.Chunk property)
provide_run_metadata (strax.storage.common.StorageFrontend attribute)
(strax.storage.files.DataDirectory attribute)
provide_superruns (strax.storage.common.StorageFrontend attribute)
(strax.storage.files.DataDirectory attribute)
provided_dtypes() (strax.context.Context method)
provides (strax.plugin.Plugin attribute)
purge_unused_configs() (strax.context.Context method)
R
raise_if_non_compatible_run_id() (strax.storage.files.DataDirectory static method)
raw_record_dtype() (in module strax.dtypes)
raw_to_records() (in module strax.processing.pulse_processing)
receive() (strax.chunk.Rechunker method)
rechunk_on_load (strax.plugin.Plugin attribute)
rechunk_on_save (strax.plugin.Plugin attribute)
Rechunker (class in strax.chunk)
record_dtype() (in module strax.dtypes)
record_length_from_dtype() (in module strax.processing.pulse_processing)
record_links() (in module strax.processing.pulse_processing)
ReductionLevel (class in strax.processing.data_reduction)
register() (strax.context.Context method)
register_all() (strax.context.Context method)
register_cut_list() (strax.context.Context method)
REMOTE (strax.storage.common.StorageType attribute)
remove() (strax.storage.common.StorageFrontend method)
(strax.storage.files.DataDirectory method)
(strax.storage.zipfiles.ZipDirectory method)
remove_titles_from_dtype() (in module strax.utils)
replace_merged() (in module strax.processing.peak_merging)
root_data_types (strax.context.Context property)
run_defaults() (strax.context.Context method)
run_id (strax.chunk.Chunk attribute)
(strax.plugin.Plugin property)
(strax.storage.common.DataKey attribute)
run_metadata() (strax.context.Context method)
(strax.storage.common.StorageFrontend method)
(strax.storage.files.DataDirectory method)
(strax.storage.zipfiles.ZipDirectory method)
RunMetadataNotAvailable
runs (strax.context.Context attribute)
S
save() (strax.storage.common.Saver method)
save_file() (in module strax.io)
save_from() (strax.storage.common.Saver method)
save_when (strax.plugin.Plugin attribute)
Saver (class in strax.storage.common)
saver() (strax.storage.common.StorageBackend method)
(strax.storage.common.StorageFrontend method)
(strax.storage.zipfiles.ZipFileBackend method)
SaveWhen (class in strax.plugin)
scan_runs() (strax.context.Context method)
search_field() (strax.context.Context method)
search_field_usage() (strax.context.Context method)
select_runs() (strax.context.Context method)
send() (strax.mailbox.Mailbox method)
set_config() (strax.context.Context method)
set_context_config() (strax.context.Context method)
set_keep_order() (in module strax.utils)
set_nan_defaults() (in module strax.utils)
setup() (strax.plugin.Plugin method)
show_config() (strax.context.Context method)
simple_summed_waveform() (in module strax.processing.peak_building)
size_mb() (strax.context.Context method)
sort_by_time() (in module strax.processing.general)
source_finished() (strax.plugin.Plugin method)
split() (strax.chunk.Chunk method)
split_array() (in module strax.chunk)
split_by_containment() (in module strax.processing.general)
split_peaks() (in module strax.processing.peak_splitting)
split_touching_windows() (in module strax.processing.general)
start (strax.chunk.Chunk attribute)
start() (strax.mailbox.Mailbox method)
storage (strax.context.Context attribute)
storage_typ (strax.storage.zipfiles.ZipDirectory attribute)
storage_type (strax.storage.common.StorageFrontend attribute)
(strax.storage.mongo.MongoFrontend attribute)
StorageBackend (class in strax.storage.common)
StorageFrontend (class in strax.storage.common)
StorageType (class in strax.storage.common)
store_downsampled_waveform() (in module strax.processing.peak_building)
stored_dependencies() (strax.context.Context method)
strax
module
strax.chunk
module
strax.config
module
strax.context
module
strax.dtypes
module
strax.io
module
strax.mailbox
module
strax.plugin
module
strax.processing
module
strax.processing.data_reduction
module
strax.processing.general
module
strax.processing.hitlets
module
strax.processing.peak_building
module
strax.processing.peak_merging
module
strax.processing.peak_properties
module
strax.processing.peak_splitting
module
strax.processing.pulse_processing
module
strax.processing.statistics
module
strax.processor
module
strax.run_selection
module
strax.storage
module
strax.storage.common
module
strax.storage.files
module
strax.storage.mongo
module
strax.storage.zipfiles
module
strax.utils
module
subruns (strax.chunk.Chunk property)
subscribe() (strax.mailbox.Mailbox method)
sum_waveform() (in module strax.processing.peak_building)
superrun (strax.chunk.Chunk property)
superrun_transformation() (strax.plugin.Plugin method)
symmetric_moving_average() (in module strax.processing.peak_splitting)
T
taken_by (strax.config.Option attribute)
takes_config (strax.context.Context attribute)
(strax.plugin.Plugin attribute)
takes_config() (in module strax.config)
TAPE (strax.storage.common.StorageType attribute)
TARGET (strax.plugin.SaveWhen attribute)
target_size_mb (strax.chunk.Chunk attribute)
to_absolute_time_range() (strax.context.Context method)
to_numpy_dtype() (in module strax.utils)
to_str_tuple() (in module strax.utils)
touching_windows() (in module strax.processing.general)
tree (strax.context.Context property)
tree_levels (strax.context.Context property)
U
unpack_dtype() (in module strax.utils)
V
validate() (strax.config.Option method)
version() (strax.plugin.Plugin class method)
W
WAVEFORM_REPLACED (strax.processing.data_reduction.ReductionLevel attribute)
writable_storage() (strax.context.Context method)
write_run_metadata() (strax.storage.common.StorageFrontend method)
(strax.storage.files.DataDirectory method)
(strax.storage.zipfiles.ZipDirectory method)
Z
zero_out_of_bounds() (in module strax.processing.pulse_processing)
zip_dir() (strax.storage.zipfiles.ZipDirectory static method)
ZipDirectory (class in strax.storage.zipfiles)
ZipFileBackend (class in strax.storage.zipfiles)